Marine Ecology Progress Series
● Inter-Research Science Center
Preprints posted in the last 90 days, ranked by how well they match Marine Ecology Progress Series's content profile, based on 21 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.
Cisternas-Novoa, C.; Romanelli, E.; Passow, U.
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Despite decades of research, the factors determining the sinking velocity of marine biogenic particles remain poorly constrained, and growing evidence suggests that particle composition and morphology are as important as size in determining particle fate. We compared characteristics of suspended and sinking particles at three depths below the mixed layer and within the layer of maximal flux attenuation during the decline of a Phaeocystis pouchetii bloom in the Labrador Sea using marine snow catchers. Biochemical and morphological characteristics of suspended and sinking particles always differed, with differences depending primarily on bloom stage, and depth accounting for comparatively less variation. Exopolymer particles played a key role, with the relative concentrations of transparent exopolymer particles consistently higher in the suspended than in the sinking particle fraction. In contrast, the partitioning of coomassie-stainable particles changed with the bloom stage, as a function of the Phaeocystis life cycle. Ballast minerals played a negligible role during the late-bloom and bloom-decline stages, and their relative importance increased during the non-bloom stage. The C:N ratio was lower in suspended than sinking particles, with differences in morphological measures depending on bloom stage. Our findings emphasize that export potential is driven not only by particle size, but also by bloom stage, which is closely linked to plankton community composition and plays a key role in the timing and magnitude of carbon flux in the upper mesopelagic. Further, this work highlights the important and diverse roles of exopolymers in regulating carbon flux.
Auscavitch, S. R.; Deere, M.; Will, M.; Breedy, O.; Cortes, J.; Cordes, E. E.
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Oxygen minimum zones (OMZs) are among the most significant abiotic environmental gradients found in the ocean. Yet, fine-scale species distribution patterns of organisms inhabiting OMZs are still spatially limited, hindering our understanding on how these oceanographic features influence species diversity and community structure. Cold-water corals are ecologically important habitat-forming species that are often considered to be sensitive to low seawater dissolved oxygen concentration and thus likely to be useful indicators for exploring change in megafaunal abundance and biodiversity across the OMZ. In the eastern tropical Pacific Ocean, widespread oxygen minimum zones and oxygen limiting zones encompass several thousand square kilometers of area and span several hundred meters of the water column, but typically are strongest between 300-700 m depth. A January 2019 cruise aboard the R/V Falkor using the ROV SuBastian, conducted video transects along 7 seamounts between the Costa Rica Margin and Isla del Coco, as well as within one submarine incised canyon on the north side of Isla del Coco. In this study, we analyzed survey data for patterns in cold-water coral species distribution, diversity, and coral community structure relative to abiotic oceanographic variables in order to gain biogeographic insights to this area. Across all sites, we identified 3675 coral occurrences and 75 unique morphospecies between 177-1565 m. Rapid species turnover with increasing depth occurred primarily across the upper (300 m) and lower OMZ boundaries (700 m). Coral assemblages within the OMZ depths were observed to contain distinct groups of species compared to those below at deeper bathyal depths. Stylasterid hydrocorals were disproportionately abundant above and within the OMZ, while octocoral and black coral species dominated in the more well-oxygenated waters below. Coral assemblage diversity and abundance was depressed within the OMZ, but bathyal diversity peaked at intermediate water depths between 1200-1500 m. In addition to assessing the impact of OMZs on coral communities, these results provide unique insights to the abundance, diversity, and environmental drivers of deep-water coral community assembly in a data-deficient locality, thus improving biodiversity metrics and informing marine conservation efforts off Costa Rica. These baseline data are particularly salient in the light of projected expansion and shoaling of eastern tropical Pacific oxygen minimum zones as a result of decreasing ocean oxygen concentrations driven by ocean warming and other climate drivers.
Roman-Torres, P.; Schofield, G.; Stiebens, V.; Roder, C.; Reischig, T.; Diniz, H.; Correia, S.; Taxonera, A.; Hays, G. C.; Eizaguirre, C.
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Linking animal movements to environmental drivers is essential for understanding ecological processes and anticipating species responses to climate change. We investigated habitat-specific movements in a globally significant aggregation of loggerhead turtles (Caretta caretta) nesting in Cabo Verde. Satellite tags on 15 adults (12 females, 3 males) provided multi-year tracks spanning breeding, migration, and foraging habitats. Movements and phenology differed by habitat. During the breeding season, females used either coastal areas, remaining within [~]20 m depth, or undertook long looping forays up to 360 km. Males showed two strategies: two remained resident in Cabo Verde waters, including Fra, the largest male tracked (Curved carapace length of 105 cm compared with a male mean of 90.7 {+/-} 10.3 cm), while the third migrated annually to distant foraging grounds and returned ahead of the subsequent breeding season. In foraging habitats, turtles adopted neritic or oceanic strategies: neritic turtles remained localised in warm, productive waters, whereas oceanic turtles ranged widely in deeper, less productive areas. Time- and space-shift analyses showed that oceanic foragers used intermediate sea surface temperature and chlorophyll-a conditions relative to nearby or temporally shifted alternatives, consistent with movement within a thermal-trophic trade-off. Together, these results show how sex, body size, and energy balance drive habitat-specific movement dynamics in a changing ocean.
Meijer, K. J.; Franken, O.; Govers, L. L.; van der Heide, T.; Willebrands, E.; de Wilt, M. E.; de Wit, B.; Olff, H.
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Benthic communities form the foundation of food webs in coastal and shelf seas worldwide. However, these communities face severe threats from anthropogenic bottom-disturbing activities. Marine Protected Areas (MPAs) effectively safeguard benthic communities against such disturbances. Nevertheless, the effectiveness of MPAs for the recovery of benthic communities in highly dynamic soft-bottom areas is much debated, as these communities are thought to be adapted to natural dynamics and therefore resistant to human impacts. In this study, we examine whether MPAs in highly dynamic seas support sensitive communities that are affected by bottom-disturbing fishing gear. Utilising a Before-After-Control-Impact (BACI) experimental design, we investigated the effects of disturbance caused by a shrimp trawl gear on macrozoobenthic communities within MPAs in a dynamic coastal soft-bottom sea over two years. We assessed changes in taxonomic and functional diversity, as well as community composition, across three levels of trawling intensity and frequency (low intensity and high frequency, high intensity and low frequency, and high intensity and high frequency) compared with undisturbed control areas. The study was carried out in the lower dynamic areas of the study system, where we found that, even light trawling gear impacted functional diversity and community assembly of macrozoobenthic communities, leading to shifts in functional groups. Contrastingly, taxonomic diversity metrics were not affected. We found that taxonomic and functional turnover increased stronger over time than the undisturbed control, with the highest turnover in the most frequently disturbed treatments. Long-living species were negatively impacted by disturbance, and the abundance of scavengers and predators increased in trawled areas, with possible radiating effects into undisturbed areas, while suspension feeders declined. Our findings demonstrate that anthropogenic disturbance remains a relevant ecological pressure, even in areas that may appear resilient due to their dynamic nature. MPAs can then provide ecological benefits by protecting sensitive and functionally important species. Article Impact StatementMarine Protected Areas are effective in safeguarding sensitive communities from anthropogenic disturbance.
Jawad, W. A.; Collin, R.; Dwane, C.; Kelly, M. W.
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O_LIThe frequency and intensity of heat events is increasing across marine and terrestrial ecosystems. Within the same ecological community, the relative exposure and sensitivity to heat stress may vary considerably among interacting species, like predators and prey. This can be especially true for species that interact at the aquatic-terrestrial interface, as well as for interactions between primarily nocturnal and diurnal species, making it difficult to predict how such communities will respond to habitat warming. C_LIO_LIThermal limit metrics such as CTmax are often assumed to equate with ecological death because such temperatures impair behavioral activity and/or physiological functioning. Prey that are diurnally active can be more frequently exposed to temperatures that approach CTmax compared to their nocturnal predators, which may use thermal refuges during the day. Yet the impacts of daytime heat exposure on nighttime predation risk remain unknown. C_LIO_LIHere, we compared the thermal environment, performance, and heat tolerance between the predatory blue crab, Callinectus sapidus and one of its prey species, the mangrove periwinkle Littoraria anguilifera in a tropical mangrove ecosystem. We examined how exposing prey to heat stress at and below their CTmax affected their capacity to avoid predation in the field at night when predation risk is highest. C_LIO_LIWe found that acute exposure to temperatures near CTmax during the day increased the prey species susceptibility to predation during recovery at night. Although both interacting predator and prey have high thermal tolerance, prey are exposed to conditions that already reach CTmax, suggesting that current extremes in temperatures may already be influencing vulnerability to predation in this ecosystem. C_LIO_LIOur results suggest that differential exposure to sublethal heat stress in diurnal prey relative to their predator, along with the subsequent impact of these exposures on predation risk, will play a role in shaping these interacting as climate warms. C_LI
Berg, J. T.; Fifer, J.; Davies, S.; Bentlage, B.
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Near-shore coral reefs in southern Guam (Mariana Islands) experience severe sedimentation, in particular during the wet season when rainfall and erosion are high. We sampled fragments of the reef-forming coral Porites lobata from opposite ends of a sedimentation gradient in Fouha Bay, southern Guam, during dry and wet seasons. Using DNA metabarcoding, we characterized the diversity and composition of P. lobata-associated Symbiodiniaceae and bacterial microbiome communities. As in many species of Porites, Symbiodiniaceae communities of P. lobata were dominated by variants of Cladocopium C15 with sites showing differences in Symbiodiniaceae communities attributable to variation in these Cladocopium C15 variants. Bacterial microbiomes of P. lobata were dominated by Endozoicomonadaceae, a family of putative coral bacterial endosymbionts involved in nutrient cycling. Site and seasonal differences in bacterial diversity and community composition were apparent. In close proximity to the mouth of the river draining into Fouha Bay, bacterial diversity was highest during the wet season when sedimentation is generally severe. Microbiome reorganization in response to sedimentation may explain this result, but we also found overrepresentation of bacteria associated with terrestrial origin close to the river mouth and/or during the wet season. Together these patterns highlight that coral Symbiodiniaceae and bacterial communities are both spatially and temporally structured in this disturbed system. IMPORTANCEThis study provides a time series dataset of coral-associated microorganisms, including dinoflagellate algae and bacteria, from a tropical bay impacted by sedimentation that results from upstream erosion of disturbed soils. Characterizing temporal patterns of coral-associated microbes provides insights into the dynamic nature of these communities. While microbiome variability across sites and seasons may be a result of acclimatization to different environmental conditions, we identified bacterial groups of putative terrestrial origin in sampled coral microbiomes that may have been exported from eroded soils to the near-shore reef. Considering that disturbed soils act as hotspots for the proliferation of potentially harmful substances, such as antimicrobial resistance genes, understanding microbial community connections at the marine-freshwater-terrestrial interface is an important step toward evaluating environmental impacts across connected ecosystems from ridge to reef.
Weber, S. B.; Afonso, A. S.; Clarke, L.; Curnick, D. J.; Cranfield, M.; Jones, K.; Letori, J.; Oliveira, P.; Simpson, D.; Simpson, T.; Viana, D.; Hussey, N. E.
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BACKGROUNDOceanic islands and seamounts are recognised as hotspots of abundance and diversity for marine top predators, such as sharks and large teleosts, and are hypothesised to function as migratory stepping stones for mobile, pelagic species. However, while movements of pelagic predators between such features have been documented in some oceans, evidence from the tropical Atlantic remains limited. RESULTSHere, we report on long-distance migrations of three species of pelagic predator between oceanic islands and seamounts in the tropical south Atlantic recorded via independent passive acoustic telemetry arrays. These include the first recorded trans-Atlantic migration of a Galapagos shark (Carcharhinus galapagensis) from Ascension Island (UK) to the Sao Pedro and Sao Paul Archipelago (Brazil) (minimum distance 1,930 km); the longest documented oceanic migration of an Almaco jack (Seriola rivoliana) from St Helena (UK) to Ascension Island (minimum 1,300 km); and multiple movements of Galapagos and silky sharks (C. falciformis) between two Mid-Atlantic Ridge seamounts and Ascension Island (minimum 265-325 km). These detections are notable given the limited duration, sample sizes, and temporal overlap of acoustic tracking studies in the region, suggesting substantial connectivity across large spatial scales. CONCLUSIONSOur findings provide empirical support for the role of oceanic islands and seamounts as connectivity hubs for pelagic predators in the tropical Atlantic, underscoring their importance as key nodes in marine protected area networks. More broadly, this study demonstrates the value of collaborative regional tracking networks in resolving large-scale movement patterns and informing marine management at ecologically relevant scales.
Gallery, D.; Abbott, E. N.; Rose Mann, L.; Huzar, A.; Primov, K. D.; Brown, C. P.; Bryant, P. L.; Sedio, B. E.; Matz, M. V.
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Reef restoration practitioners aim to preserve coral genetic diversity by protecting reefs and cultivating diverse genotypes in coral nurseries. However, cryptic genetic lineages in most corals complicate restoration strategies, as the role of between-lineage genetic divergence remains unclear regarding adaptation. In Montastraea cavernosa, researchers have identified cryptic lineages, some strongly segregated by depth. We conducted a ten-week reciprocal transplantation experiment using two cryptic lineages restricted to shallow water (<10m depth), with one lineage more common on nearshore reefs and the other on offshore reefs. We aimed to quantify lineage-specific responses to the environment that explain the genetic and ecological divergence between the two lineages. Surprisingly, the strongest response was not lineage-specific. Instead, both lineages exhibited strong and similar changes in growth and metabolomic profiles, depending on the transplantation habitat. These results suggest that cryptic lineages employ similar mechanisms of adaptation and acclimatization to environmental challenges, despite their genetic distinction.
Nunez, P.; Luna-Jorquera, G.
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The Salas y Gomez and Nazca Ridges (SGNRs) in the Southeast Pacific, recognized as an Ecologically or Biologically Significant Area (EBSA), host unique marine ecosystems with one of the highest rates of endemism on the planet. This study provides the first comprehensive trait-based assessment of seabird functional diversity in this globally significant region, focusing on their ecological contributions as top predators. Using at-sea abundance data from 11 oceanographic surveys (2014-2017) across 3,500 km of transects, we recorded 36 seabird species (8,179 individuals). We analysed functional diversity through ten foraging-related traits, including diet, foraging strata, and morphology. Multidimensional trait analyses revealed a seabird assemblage characterised by low functional richness (FRic = 0.0587), moderate-to-low evenness (FEve = 0.3649), and high divergence (FDiv = 0.6609), with non-random patterns confirmed by null models. Nesting (17 species) and non-nesting (19 species) groups showed distinct functional structures, with nesting seabirds exhibiting higher functional divergence and non-nesting seabirds greater functional evenness, though with 61% trait-space overlap. Low functional redundancy suggests that the loss of seabird species would likely translate into the loss of unique functional roles, potentially compromising ecosystem processes such as cross-system nutrient subsidies. With 73% of the SGNRs beyond national jurisdiction, seabirds face threats from unregulated fishing, plastic pollution, and seabed mining. These findings underscore the urgent need for conservation strategies under the High Seas Treaty (BBNJ treaty) to protect not only species richness but also functional roles, ensuring ecosystem resilience in this biodiversity hotspot of over 110 seamounts.
Kruger, L.; Santa Cruz, F.; Marquez, M.; Vianna, J. A.; Santos, M.; Pinones, A.; Cardenas, C.
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Fledging is a critical period of a seabird life cycle. Using satellite telemetry, we compared movements and survival proxies (transmission duration) of chinstrap penguin fledglings tracked in 2017 (n=8) and 2025 (n=17) relative to krill fishing vessel activity. In 2017, fishing vessels operated intensively near colonies during summer, resulting in early, frequent encounters (median 1.3 days post-fledging) and short transmission durations (median 9.2 days). In 2025, reduced fishing delayed encounters (median 10.0 days) and tripled tracking duration (median 24.0 days). Hidden Markov Models revealed that vessel encounters reduced the probability of transitioning from foraging to transit behavior ({beta} = -0.76), an effect stronger than the productivity ({beta} = -0.11). While 87.5% of 2017 fledglings ceased transmission prematurely within weeks (half of those right after entering areas intensively used by fishing vessels), 65% of 2025 fledglings survived beyond March, with half of those five transmitting until May after dispersing eastward to the South Orkney Islands. These findings suggest that spatiotemporal overlap with krill fisheries during the critical post-fledging window affected foraging behavior and was associated with shorter transmission durations. Our results support further research of post-fledging penguin ecology to better understand the potential impact of fishery, and, following the precautionary principle, support fishing seasonal protection of important areas during critical periods of krill predators life cycle.
Eddington, V. M.; Fradet, D. T.; Craig, E. C.; Cimino, M. A.; White, E. R.; Kloepper, L. N.
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Migratory seabirds are valuable indicators of marine ecosystem change but can be difficult to monitor during the breeding season due to dense colonies, remote breeding sites, and sensitivity to investigator disturbance. Passive acoustic monitoring offers a minimally invasive alternative to traditional surveys; however, high call overlap in large colonies complicates approaches that rely on identifying individual vocalizations. In this study, we evaluate acoustic energy as a simple soundscape metric for monitoring breeding phenology in colonial seabirds. Using a comparative approach, we deployed autonomous recorders at breeding colonies of Adelie penguins (Pygoscelis adeliae) in the Western Antarctic Peninsula and common terns (Sterna hirundo) in the Gulf of Maine. We examined seasonal patterns in acoustic energy and compared these trends with known breeding stages and colony observations. Across both species, acoustic energy exhibited distinct seasonal patterns that correspond to key phenological stages, including courtship, incubation, chick rearing, and fledging. These stages are associated with distinctive colony-wide behavioral shifts in colony attendance, territorial interactions, and parent-offspring communication that structure the breeding-season soundscape. Our results demonstrate that colony-wide acoustic energy can capture key phenological transitions in seabird colonies and provide a scalable, minimally invasive approach for monitoring breeding dynamics in remote or rapidly changing environments. HighlightsO_LIPassive acoustic monitoring can track bioindicator phenology under climate change C_LIO_LIAmplitude captures colony-level activity in dense seabird colonies C_LIO_LISoundscape patterns correspond to key breeding stages C_LIO_LIEffective in both temperate and polar seabird systems C_LIO_LIEnables scalable, low-disturbance monitoring in remote systems C_LI
Cabrera-Rivera, E.; de Bakker, D.; Molina-Hernandez, A. L.; Medellin-Maldonado, F.; Rioja-Nieto, R.; Medina-Valmaseda, A. E.; Perez-Cervantes, E.; Perry, C.; Alvarez-Filip, L.
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Coral reefs deliver vital services via a complex three-dimensional framework sustained by the balance between calcium carbonate production and erosion, or the net carbonate budget state. In many tropical western Atlantic reefs, ecological decline has reduced carbonate production, yielding near-neutral or negative budgets. Yet some reefs retain high coral cover and, theoretically, should also have high net positive budgets, yet often show modest carbonate accumulation. We used the remote reef of Cayo Arenas in the Campeche Bank, Gulf of Mexico, to test whether in reefs under suboptimal (variable) environmental conditions, high coral production is offset by robust bioeroder communities, producing neutral budgets. At 14 sites, we quantified carbonate producers and bioeroders to estimate gross production, bioerosion, and net budget states. Despite relatively high live coral cover, mean net carbonate budgets were approximately neutral. Crucially, this neutrality arose not from depressed biological activity (as in degraded reefs) but from an active equilibrium: vigorous carbonate production coupled with substantial bioerosion. These reefs, therefore, represent a contemporary, functional reef state in net stasis. Distinguishing active-neutral from impoverishment-neutral regimes is critical for predicting reef trajectories under environmental change and for targeting management, although near-stasis emerging from high carbonate turnover can appear functionally intact yet operate with limited buffering capacity against net carbonate loss.
Hendricks, S. F.; Tan, A. L.; Williams, A. G.; Buckley, K. M.; Strader, M. E.
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Ocean warming is altering abiotic environments and biotic interactions experienced by marine organisms, where sensitive early developmental windows occur in biologically complex seawater communities. The impact of these interactions on developmental processes and fitness in hosts is not well understood, but likely contingent on the establishment of a host-associated microbiome. Here, we hypothesize that temperature and microbial exposure during embryogenesis influence larval microbiome assembly and host morphology. Strongylocentrotus purpuratus embryos were raised in low microbial richness (LMR) or high microbial richness (HMR) seawater at ambient (14 {degrees}C) or elevated (18 {degrees}C) temperature, then collected at 2, 4, and 6 days post-fertilization (dpf) following multiple feedings. Higher microbial diversity was observed in larvae that developed in HMR seawater when compared to LMR. Differences in relative abundances of dominant microbial families between seawater and larvae suggest some degree of host selectivity in microbiome assembly. Temperature did not strongly alter microbiome composition, but both temperature and microbial condition led to differences in larval morphology by 6 dpf, potentially due to enrichment of microbes with chemoheterotrophic functions. By linking how temperature and microbial communities interact with host development, we contribute novel insights into how early-life environmental conditions impact holobiont formation and morphology. One sentence summaryEarly developmental temperature and microbial conditions shape larval microbiome establishment and morphology.
Guilford-Pearce, B. J.; Staiger, M.; Stevens, G. M. W.; Doherty, P. D.; Ali, J.
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Reef manta rays (Mobula alfredi) are threatened by fishing and other anthropogenic threats. Which, when coupled with conservative life history traits, have made this species vulnerable to extinction. Spatiotemporal ecological knowledge, such as site fidelity and visitation patterns to key aggregation sites, are imperative for effective conservation management of M. alfredi. A novel method of environmental sensing, remote underwater photo systems (RUPs), was employed to understand drivers of M. alfredi habitat use and resighting patterns. RUPs were deployed at four cleaning sites around Laamu Atoll, Maldives. Between March 2021 and May 2023, 455,458 photos were analysed. Generalised linear models revealed increases in M. alfredi presence in response to high chlorophyll-a concentrations, low illumination moon states, the Southwest Monsoon, and in the morning, while human presence had no effect. Branchial spot patterns allowed for 81 M. alfredi individuals to be identified, from 629 sightings, representing 51.59% of Laamu Atolls previously identified population (n = 157). Cleaning stations are visited more intensively during periods of increased productivity of the Southwest Monsoon, likely in response to greater foraging opportunities near the study areas. Additionally, moon state, used as a proxy for tidal strength, was associated with increased visitation during new moon periods, suggesting that weaker tidal states may facilitate presence. These data support integrating RUPs with observational surveys to improve inferences about habitat use and our understanding of cleaning sites frequented by M. alfredi. This study aims to inform the implementation of Laamu Atolls first marine protected area management plan.
Szereday, S.; Chew, L. K.; Henry, J. A.; Zulaikha, N.; Voolstra, C. R.
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Global marine heatwaves have devastated tropical coral reefs, and further mortality is projected under ongoing climate change. Identifying thermally tolerant coral colonies is therefore a priority for conservation, restoration, and research. Portable acute heat stress assays (e.g., CBASS) enable rapid, standardized estimates of coral thermal tolerance under field conditions. However, it remains unresolved whether such experimentally derived metrics (ED5, ED50, DW) predict bleaching and mortality in situ. Here, we quantified acute thermal tolerance metrics for 2,068 coral colonies across 12 common Indo-Pacific species, six months prior to an unprecedented heat stress event in northeastern Peninsular Malaysia and compared experimentally derived ED and DW values to subsequent bleaching severity and mortality in the field. Experimental thermal tolerance metrics explained only a limited proportion of variation in bleaching outcomes and survival. Predictive power varied among species and was higher in slow-growing species. Our findings suggest that while acute heat stress assays capture substantial variation in coral thermal tolerance, their ability to predict in situ outcomes is context-dependent and diminishes under severe thermal stress. Ultimately, in situ coral bleaching under severe heat stress may reduce the discriminatory capacity of acute assay-derived tolerance metrics.
Forbes, E. J.; Stockwell, J. D.
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Encounter rate models are important tools for evaluating and estimating trophic interactions between species. While encounter rate parameters have been measured for many freshwater pelagic fishes, most benthic fishes remain mostly unstudied. Those few efforts to generate encounter rate models for benthic fishes often hold mathematical assumptions based on visual foraging, despite the many cases in which benthic fishes employ the lateral line to forage. Furthermore, encounter rate models are rarely compared, despite the many cases in which prey animals face predation risk from multiple types of predators. For example, the macroinvertebrate Mysis is exposed to both benthic and pelagic predation risk during diel vertical migration (DVM). Comparing the risks between habitats could help evaluate predation risk as an ultimate cause of their DVM behavior. We created a novel encounter rate model based on lateral line ("tactile") foraging by sculpins (Cottidae) given the saltatory (stop-and-go) nature of their movement. The tactile model demonstrated variation in behavior and peak encounter rate with detection distance, movement velocity, and rest durations. We then directly compared predation risk for Mysis by parameterizing both our tactile benthic (2D) encounter rate model for sculpin and a visual pelagic (3D) for rainbow smelt (Osmerus mordax). Tactile encounter rates were generally lower than visual rates for individual predators. However, population level encounter rates at night were greater in the benthic habitat than the pelagic habitat. Overall, our model estimates of encounter rates were consistent with the long-standing hypothesis that predation is an ultimate driver of DVM behavior.
McInnes, J. C.; Burgess, T.; Mergard, G.; Wells, M. R.; McMahon, C. R.; Neave, M. J.; Polanowski, A.; Terauds, A.; Tornos, J.; Lejeune, M.; Briand, F.-X.; Baele, G.; Boulinier, T.; Achurch, H.; Alderman, R.; Lashko, A.; Wienecke, B.; Wynen, L. P.; Viola, B.; Virtue, P.; Hodgson, J. C.
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High pathogenicity avian influenza (HPAI) has spread across the sub-Antarctic, causing significant wildlife impacts. We report its first detection in an Australian external territory, Heard Island and McDonald Islands, which supports over one million breeding seabirds and seals. Drone and ground surveys (October 2025, January 2026), combined with viral genome analysis, confirmed infection with Influenza A H5N1 clade 2.3.4.4b at Heard Island. Drone surveys revealed mass mortality in southern elephant seals, with 8,573 pups (62%) recorded dead across Heard Island by the final surveys. Mortality increased at an average rate of 5.6% per day in a subset of harems, and the highest observed mortality in a harem was 97%. Based on the average (76%) mortality in the final surveys, total estimated pup mortality at Heard Island was 13,359 (from a total population of 17,364 pups), though this may be an underestimate as mortality was ongoing at this time. HPAI was detected in six of nine species tested and, we suspect, led to elevated mortality in king and gentoo penguins. Phylogenetic analysis indicates the virus was introduced from Crozet Islands, with an estimated arrival around August 2025. These data show the continued easterly spread of HPAI around the sub-Antarctic, with severe but heterogeneous impacts across taxa. Our results demonstrate the value of drones for large-scale monitoring, underscoring the need for continued and enhanced HPAI surveillance across the Southern Ocean.
Gillis, A. J.; Thomsen, M. S.; Gerber, D.; Hernandez-Carrasco, D.; Tonkin, J. D.
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The effect that environmental conditions have on community and network assembly processes remains unclear, in part because these processes operate at multiple scales. Because marine primary producers and microinvertebrates have limited mobility, are susceptible to multiple stressors, and can be observed interacting in situ, their habitat-based interactions provide an informative system for disentangling network organising processes. We sampled 646 habitat-use networks, quantifying interactions involving habitat-users and biogenic habitat-formers over 12 months at 9 sites within Te Ihutai/Avon-Heathcote estuary in Christchurch, Aotearoa New Zealand. Using generalised dissimilarity mixed-effect models, we examined whether changes to species interactions - deconstructed into species turnover and interaction rewiring - were modulated by environmental covariates, including freshwater discharge, elevation, temperature, spatial location and season. We found that with increasing dissimilarity in sites proximity to freshwater, interaction change was more driven by rewiring, whereas differences in elevation (i.e., between channels and non-channel habitats) were driven by species turnover, with more sessile species inhabiting tidal channels. The proximity of habitats also played a strong role, with nearby networks comprising more similar interactions, and species turnover becoming more prevalent with increasing distance. Our results highlight that the relative influence and magnitude of rewiring and species turnover in controlling estuarine interaction networks was affected by the individual species distributions across the estuary and their responses to separate, but co-occurring, environmental factors. Quantification of habitat-former/user interaction networks offers robust, albeit understudied, measures of processes that can underpin community assembly, highlighting their potential importance in research, management and conservation.
Baker, M. L.; Forss, E.; Kolzenburg, R.; Collins, S.; Kranz, S. A.
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John Raven pioneered the field of algae ecophysiology, advancing our understanding of cellular resource economics, carbon acquisition, and energy allocation. His work laid the foundation for investigating integrative physiology, linking growth-survival trade-offs across diverse environments. The sea ice habitat provides an excellent framework to continue the research John championed. With steep temperature-salinity gradients, algae survival requires a shift in physiology that we are only beginning to understand. We developed two small scale, reproducible icecosms to investigate physiological changes associated with incorporation into sea ice and survival potential post-melt. Fragilariopsis cylindrus and Nitzschia frigida, known for their association with the ice environment, and Porosira glacialis, known for its association with the ice edge, were used to mechanistically link physical properties with algal physiology and post-melt survival. We observe incorporation into the ice of F. cylindrus and N. frigida alongside vertical photophysiological profiles of F. cylindrus revealing inhospitable conditions in the top compared to the bottom layers of ice. N. frigida and P. glacialis remain viable within the ice and retain the capacity to seed populations following melt. Our results establish icecosms as experimental framework to investigate ecophysiological responses of sea ice algae and provide a foundation toward ecological and evolutionary questions.
Ogonowski, M.
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Littoral mysids facilitate benthic-pelagic coupling through horizontal migration, yet quantitative monitoring in structurally complex habitats remains methodologically challenged where traditional active gears fail. We evaluated the efficacy of standardized light traps for monitoring littoral mysids (Neomysis integer, Praunus flexuosus) and mesopredatory three-spined sticklebacks (Gasterosteus aculeatus) in the northern Baltic proper, Baltic Sea. Using a paired experimental design with predator-exclusion and unmodified traps, alongside concurrent passive benthic trapping, we assessed abiotic drivers affecting catchability, biotic interactions, and statistical power to monitor changes in population size over time. Results indicated significant biotic interference: unmodified traps attracted high densities of sticklebacks, which reduced mysid catches by approximately 85% through predation or behavioural avoidance. Consequently, physical predator exclusion is mandatory for accurate mysid sampling. Generalized Linear Mixed Models (GLMMs) confirmed that catch rates for all taxa were primarily driven by night duration rather than water temperature. While passive benthic trap catches tracked metabolic activity (peaking in warm summer months), light trap efficiency peaked in spring and collapsed during summer, confirming that sampling efficiency was strictly limited by the short duration of the night. Simulation-based power analysis revealed a stark contrast in monitoring utility based on spatial aggregation. For highly aggregated mysids, the method demonstrated low precision (Power < 0.25 to detect a 50% decline), rendering it suitable primarily for detecting substantial population collapses (>90%). In contrast, for less aggregated sticklebacks, the method achieved a more robust statistical power (>0.80 for a 60% decline), validating light traps as a precise tool for monitoring these abundant mesopredators. We conclude that light traps fill a critical methodological gap for winter and early spring monitoring when traditional passive gears underperform. Appropriate abundance indices should be based on statistical models accounting for night duration and strictly employ physical exclusion barriers when targeting mysids.